Imprinting Articles : Evolution

Below are selected articles on genomic imprinting organized by subject. Select a subject by clicking its tab. Hover over each article's title to view its abstract, and click the title to view its full PubMed record. Corresponding authors follow the author list, and fulltext PDFs are available for some articles and reviews.

• Imprinted Genes
• Regulation
• Cancer
• Developmental Disorders
• Fetal Origins of Disease
• Epigenetics
• Evolution

• Do social insects support Haig's kin theory for the evolution of genomic imprinting?
  Pegoraro M, Marshall H, Lonsdale ZN, Mallon EB
  Epigenetics (Jul 2017)
• Humanized H19/Igf2 locus reveals diverged imprinting mechanism between mouse and human and reflects Silver-Russell syndrome phenotypes
  Hur SK, Freschi A, Ideraabdullah F, Thorvaldsen JL, Luense LJ, Weller AH, Berger SL, Cerrato F, Riccio A, Bartolomei MS
  Proc Natl Acad Sci U S A 113:10938-43 (2016)
• Genetic sources of population epigenomic variation
  Taudt A, Colome-Tatche M, Johannes F
  Nat Rev Genet 17:319-32 (2016)
• Quantitative and functional interrogation of parent-of-origin allelic expression biases in the brain
  Perez JD, Rubinstein ND, Fernandez DE, Santoro SW, Needleman LA, Ho-Shing O, Choi JJ, Zirlinger M, Chen SK, Liu JS, Dulac C
  Elife 4: (2015)
• Maternal-fetal conflict, genomic imprinting and mammalian vulnerabilities to cancer
  Haig D
  Philos Trans R Soc Lond B Biol Sci 370: (2015)
• Germline and somatic imprinting in the nonhuman primate highlights species differences in oocyte methylation
  Cheong CY, Chng K, Ng S, Chew SB, Chan L, Ferguson-Smith AC
  Genome Res 25:611-23 (2015)
• Brain feminization requires active repression of masculinization via DNA methylation
  Nugent BM, Wright CL, Shetty AC, Hodes GE, Lenz KM, Mahurkar A, Russo SJ, Devine SE, McCarthy MM
  Nat Neurosci 18:690-7 (2015)
• Genetic conflict reflected in tissue-specific maps of genomic imprinting in human and mouse
  Babak T, DeVeale B, Tsang EK, Zhou Y, Li X, Smith KS, Kukurba KR, Zhang R, Li JB, van der Kooy D, Montgomery SB, Fraser HB
  Nat Genet (Apr 2015)
• Antagonistic roles in fetal development and adult physiology for the oppositely imprinted Grb10 and Dlk1 genes
  Madon-Simon M, Cowley M, Garfield AS, Moorwood K, Bauer SR, Ward A
  BMC Biol 12:771 (2014)
  → Feature Article and Press Reports
• Genomic imprinting, action, and interaction of maternal and fetal genomes
  Keverne EB
  Proc Natl Acad Sci U S A (Nov 2014)
• Review: Mammalian viviparity: a complex niche in the evolution of genomic imprinting
  Keverne EB
  Heredity (Edinb) (Feb 2014)
• Review: Methylation and worker reproduction in the bumble-bee (Bombus terrestris)
  Amarasinghe HE, Clayton CI, Mallon EB
  Proc Biol Sci 281:20132502 (2014)
• Expression and genomic imprinting of the porcine Rasgrf1 gene
  Ding YY, Liu LY, Zhou J, Zhang XD, Huang L, Zhang SJ, Yin ZJ
  Gene 536:357-61 (2014)
• Genome-wide nucleosome map and cytosine methylation levels of an ancient human genome
  Pedersen JS, Valen E, Vargas Velazquez AM, Parker BJ, Rasmussen M, Lindgreen S, Lilje B, Tobin DJ, Kelly TK, Vang S, Andersson R, Jones PA, Hoover CA, Tikhonov A, Prokhortchouk E, Rubin EM, Sandelin A, Gilbert MT, Krogh A, Willerslev E, Orlando L
  Genome Res (Dec 2013)
• Environmental Epigenomics in Health and Disease
  Jirtle RL, Tyson FL
  Springer (May 2013)
  → Feature Article and Press Reports
• Review: A survey of tissue-specific genomic imprinting in mammals
  Prickett AR, Oakey RJ
  Mol Genet Genomics 287:621-30 (2012)
• A nucleolar protein, H19 opposite tumor suppressor (HOTS), is a tumor growth inhibitor encoded by a human imprinted H19 antisense transcript
  Onyango P, Feinberg AP
  Proc Natl Acad Sci U S A 108:16759-64 (2011)
• Genomic imprinting: the emergence of an epigenetic paradigm
  Ferguson-Smith AC
  Nat Rev Genet 12:565-75 (2011)
• A Model for Genomic Imprinting in the Social Brian: Juveniles
  Ubeda F, Gardner A
  Evolution (Apr 2010)
• A role for the elongator complex in zygotic paternal genome demethylation
  Okada Y, Yamagata K, Hong K, Wakayama T, Zhang Y [Yi Zhang]
  Nature 463:554-8 (2010)
• Epigenetic profiling at mouse imprinted gene clusters reveals novel epigenetic and genetic features at differentially methylated regions
  Dindot SV, Person R, Strivens M, Garcia R, Beaudet AL
  Genome Res (Jun 2009)
• Transposable elements and an epigenetic basis for punctuated equilibria
  Zeh DW, Zeh JA, Ishida Y [DW Zeh]
  Bioessays 31:715-26 (2009)
• Detection of transgenerational spermatogenic inheritance of adult male acquired CNS gene expression characteristics using a Drosophila systems model
  Sharma A, Singh P
  PLoS ONE 4:e5763 (2009)
• Interview Epigenomics, imprinting and disease susceptibility
  Jirtle RL [R Jirtle]
  Pharmacogenomics 9:1791-5 (2008)
  Fulltext (PDF)
• Conservation of the H19 noncoding RNA and H19-IGF2 imprinting mechanism in therians
  Smits G, Mungall AJ, Griffiths-Jones S, Smith P, Beury D, Matthews L, Rogers J, Pask AJ, Shaw G, VandeBerg JL, McCarrey JR, Renfree MB, Reik W, Dunham I
  Nat Genet 40:971-6 (2008)
• Viviparity-driven Conflict: More to Speciation than Meets the Fly
  Zeh JA, Zeh DW [JA Zeh]
  Ann N Y Acad Sci 1133:126-48 (2008)
• Randy L Jirtle, PhD: epigenetics a window on gene dysregulation, disease Interview by Bridget M Kuehn
  Kuehn BM
  JAMA 299:1249-250 (2008)
  Fulltext (PDF)
• Comparative analysis of sequence characteristics of imprinted genes in human, mouse, and cattle
  Khatib H, Zaitoun I, Kim ES
  Mamm Genome (Jul 2007)
• Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences
  Mikkelsen TS, Wakefield MJ, Aken B, Amemiya CT, Chang JL, Duke S, Garber M, Gentles AJ, Goodstadt L, Heger A, Jurka J, Kamal M, Mauceli E, Searle SM, Sharpe T, Baker ML, Batzer MA, Benos PV, Belov K, Clamp M, Cook A, Cuff J, Das R, Davidow L, Deakin JE, Fazzari MJ, Glass JL, Grabherr M, Greally JM, Gu W, Hore TA, Huttley GA, Kleber M, Jirtle RL, Koina E, Lee JT, Mahony S, Marra MA, Miller RD, Nicholls RD, Oda M, Papenfuss AT, Parra ZE, Pollock DD, Ray DA, Schein JE, Speed TP, Thompson K, VandeBerg JL, Wade CM, Walker JA, Waters PD, Webber C, Weidman JR, Xie X, Zody MC, Baldwin J, Abdouelleil A, Abdulkadir J, Abebe A, Abera B, Abreu J, Acer SC, Aftuck L, Alexander A, An P, Anderson E, Anderson S, Arachi H, Azer M, Bachantsang P, Barry A, Bayul T, Berlin A, Bessette D, Bloom T, Bloom T, Boguslavskiy L, Bonnet C, Boukhgalter B, Bourzgui I, Brown A, Cahill P, Channer S, Cheshatsang Y, Chuda L, Citroen M, Collymore A, Cooke P, Costello M, D'Aco K, Daza R, De Haan G, DeGray S, DeMaso C, Dhargay N, Dooley K, Dooley E, Doricent M, Dorje P, Dorjee K, Dupes A, Elong R, Falk J, Farina A, Faro S, Ferguson D, Fisher S, Foley CD, Franke A, Friedrich D, Gadbois L, Gearin G, Gearin CR, Giannoukos G, Goode T, Graham J, Grandbois E, Grewal S, Gyaltsen K, Hafez N, Hagos B, Hall J, Henson C, Hollinger A, Honan T, Huard MD, Hughes L, Hurhula B, Husby ME, Kamat A, Kanga B, Kashin S, Khazanovich D, Kisner P, Lance K, Lara M, Lee W, Lennon N, Letendre F, LeVine R, Lipovsky A, Liu X, Liu J, Liu S, Lokyitsang T, Lokyitsang Y, Lubonja R, Lui A, MacDonald P, Magnisalis V, Maru K, Matthews C, McCusker W, McDonough S, Mehta T, Meldrim J, Meneus L, Mihai O, Mihalev A, Mihova T, Mittelman R, Mlenga V, Montmayeur A, Mulrain L, Navidi A, Naylor J, Negash T, Nguyen T, Nguyen N, Nicol R, Norbu C, Norbu N, Novod N, O'Neill B, Osman S, Markiewicz E, Oyono OL, Patti C, Phunkhang P, Pierre F, Priest M, Raghuraman S, Rege F, Reyes R, Rise C, Rogov P, Ross K, Ryan E, Settipalli S, Shea T, Sherpa N, Shi L, Shih D, Sparrow T, Spaulding J, Stalker J, Stange-Thomann N, Stavropoulos S, Stone C, Strader C, Tesfaye S, Thomson T, Thoulutsang Y, Thoulutsang D, Topham K, Topping I, Tsamla T, Vassiliev H, Vo A, Wangchuk T, Wangdi T, Weiand M, Wilkinson J, Wilson A, Yadav S, Young G, Yu Q, Zembek L, Zhong D, Zimmer A, Zwirko Z, Jaffe DB, Alvarez P, Brockman W, Butler J, Chin C, Gnerre S, MacCallum I, Graves JA, Ponting CP, Breen M, Samollow PB, Lander ES, Lindblad-Toh K
  Nature 447:167-77 (2007)
  Fulltext (PDF)
• Review: The silence of genes Is genomic imprinting the software of evolution or just a battleground for gender conflict?
  Hunter P
  EMBO Rep 8:441-3 (2007)
  Fulltext (PDF)
• Review: Germline histone dynamics and epigenetics
  Ooi SL, Henikoff S
  Curr Opin Cell Biol 19:1-9 (2007)
• Retrotransposon Silencing by DNA Methylation Can Drive Mammalian Genomic Imprinting
  Suzuki S, Ono R, Narita T, Pask AJ, Shaw G, Wang C, Kohda T, Alsop AE, Marshall Graves JA, Kohara Y, Ishino F, Renfree MB, Kaneko-Ishino T
  PLoS Genet 3:e55 (2007)
• Review: Imprinted and More Equal
  Jirtle RL, Weidman JR [RL Jirtle]
  Am Sci 95:143-149 (2007)
  Fulltext (PDF)→ Feature Article and Press Reports
• Review: Environmental epigenomics and disease susceptibility
  Jirtle RL, Skinner MK
  Nat Rev Genet 8:253-62 (2007)
  Fulltext (PDF)
• Genes flanking Xist in mouse and human are separated on the X chromosome in American marsupials
  Shevchenko AI, Zakharova IS, Elisaphenko EA, Kolesnikov NN, Whitehead S, Bird C, Ross M, Weidman JR, Jirtle RL, Karamysheva TV, Rubtsov NB, Vandeberg JL, Mazurok NA, Nesterova TB, Brockdorff N, Zakian SM
  Chromosome Res 15:127-36 (2007)
  Fulltext (PDF)
• Convergent evolution of genomic imprinting in plants and mammals
  Feil R, Berger F
  Trends Genet (Feb 2007)
• Igf-2r expression regulated by epigenetic modification and the locus of gene imprinting disrupted in cloned cattle
  Long JE, Cai X
  Gene 388:125-34 (2007)
• Imprinting of Opossum Igf2r in the Absence of Differential Methylation and Air
  Weidman JR, Dolinoy DC, Maloney KA, Cheng JF, Jirtle RL [RL Jirtle]
  Epigenetics 1:49-54 (2006)
  Fulltext (PDF)
• Review: Cross-species clues of an epigenetic imprinting regulatory code for the IGF2R gene
  Vu TH, Jirtle RL, Hoffman AR
  Cytogenet Genome Res 113:202-8 (2006)
  Fulltext (PDF)
• Comparative phylogenetic analysis reveals multiple non-imprinted isoforms of opossum Dlk1
  Weidman JR, Maloney KA, Jirtle RL [RL Jirtle]
  Mamm Genome 17:157-67 (2006)
  Fulltext (PDF)
• Comparative phylogenetic analysis of blcap/nnat reveals eutherian-specific imprinted gene
  Evans HK, Weidman JR, Cowley DO, Jirtle RL [RL Jirtle]
  Mol Biol Evol 22:1740-8 (2005)
  Fulltext (PDF)
• Abnormal postnatal maintenance of elevated DLK1 transcript levels in callipyge sheep
  Murphy SK, Freking BA, Smith TP, Leymaster K, Nolan CM, Wylie AA, Evans HK, Jirtle RL
  Mamm Genome 16:171-83 (2005)
  Fulltext (PDF)
• Phylogenetic footprint analysis of IGF2 in extant mammals
  Weidman JR, Murphy SK, Nolan CM, Dietrich FS, Jirtle RL [RL Jirtle]
  Genome Res 14:1726-32 (2004)
  Fulltext (PDF)→ Feature Article and Press Reports
• An Early Cretaceous tribosphenic mammal and metatherian evolution
  Luo ZX, Ji Q, Wible JR, Yuan CX [ZX Luo]
  Science 302:1934-40 (2003)
  → Feature Article and Press Reports
• Review: The monotreme genome: a patchwork of reptile, mammal and unique features?
  Grützner F, Deakin J, Rens W, El-Mogharbel N, Marshall Graves JA [F Grützner] [JA Marshall Graves]
  Comp Biochem Physiol A Mol Integr Physiol 136:867-81 (2003)
• The evolution of tribospheny and the antiquity of mammalian clades
  Woodburne MO, Rich TH, Springer MS [MO Woodburne]
  Mol Phylogenet Evol 28:360-85 (2003)
• Review: Chromatin modification and epigenetic reprogramming in mammalian development
  Li E [E Li]
  Nat Rev Genet 3:662-73 (2002)
• The earliest known eutherian mammal
  Ji Q, Luo ZX, Yuan CX, Wible JR, Zhang JP, Georgi JA [ZX Luo]
  Nature 416:816-22 (2002)
• Divergent evolution in M6P/IGF2R imprinting from the Jurassic to the Quaternary
  Killian JK, Nolan CM, Wylie AA, Li T, Vu TH, Hoffman AR, Jirtle RL [RL Jirtle]
  Hum Mol Genet 10:1721-8 (2001)
  Fulltext (PDF)→ Feature Article and Press Reports
• Imprint status of M6P/IGF2R and IGF2 in chickens
  Nolan CM, Killian JK, Petitte JN, Jirtle RL [RL Jirtle]
  Dev Genes Evol 211:179-83 (2001)
  Fulltext (PDF)
• Marsupials and Eutherians reunited: genetic evidence for the Theria hypothesis of mammalian evolution
  Killian JK, Buckley TR, Stewart N, Munday BL, Jirtle RL [RL Jirtle]
  Mamm Genome 12:513-7 (2001)
  Fulltext (PDF)→ Feature Article and Press Reports
• Review: Evolution of imprinting mechanisms: the battle of the sexes begins in the zygote
  Reik W, Walter J [W Reik] [J Walter]
  Nat Genet 27:255-6 (2001)
• Review: Comparative genomics sheds light on mechanisms of genomic imprinting
  Vu TH, Hoffman AR [TH Vu] [AR Hoffman]
  Genome Res 10:1660-3 (2000)
• Delta-like and gtl2 are reciprocally expressed, differentially methylated linked imprinted genes on mouse chromosome 12
  Takada S, Tevendale M, Baker J, Georgiades P, Campbell E, Freeman T, Johnson MH, Paulsen M, Ferguson-Smith AC [AC Ferguson-Smith]
  Curr Biol 10:1135-8 (2000)
• Review: Genomic imprinting, mammalian evolution, and the mystery of egg-laying mammals
  John RM, Surani MA [MA Surani]
  Cell 101:585-8 (2000)
• M6P/IGF2R imprinting evolution in mammals
  Killian JK, Byrd JC, Jirtle JV, Munday BL, Stoskopf MK, MacDonald RG, Jirtle RL [RL Jirtle]
  Mol Cell 5:707-16 (2000)
  Fulltext (PDF)→ Feature Article and Press Reports
• The disparate maternal aunt-uncle ratio in male transsexuals: an explanation invoking genomic imprinting
  Green R, Keverne EB [R Green]
  J Theor Biol 202:55-63 (2000)
• Review: The hows and whys of imprinting
  Kelsey G [G Kelsey]
  Trends Genet 16:15-6 (2000)
• Review: Genomic imprinting in mammals: an interplay between chromatin and DNA methylation?
  Feil R, Khosla S [R Feil]
  Trends Genet 15:431-5 (1999)
• Genomic imprinting is disrupted in interspecific Peromyscus hybrids
  Vrana PB, Guan XJ, Ingram RS, Tilghman SM [SM Tilghman]
  Nat Genet 20:362-5 (1998)
• Review: Sex and conflict
  Partridge L, Hurst LD [LD Hurst]
  Science 281:2003-8 (1998)
• Review: Genomic imprinting in mammals
  Bartolomei MS, Tilghman SM [SM Tilghman]
  Annu Rev Genet 31:493-525 (1997)
• Review: Imprinted genes in liver carcinogenesis
  De Souza AT, Yamada T, Mills JJ, Jirtle RL [RL Jirtle]
  FASEB J 11:60-7 (1997)
  Fulltext (PDF)
• Altercation of generations: genetic conflicts of pregnancy
  Haig D [D Haig]
  Am J Reprod Immunol 35:226-32 (1996)
• Review: There is another: H3K27me3-mediated genomic imprinting
  Raas MWD, Zijlmans DW, Vermeulen M, Marks H
  Trends Genet 38:82-96 (2022)
• Review: The human imprintome: regulatory mechanisms, methods of ascertainment, and roles in disease susceptibility
  Skaar DA, Li Y, Bernal AJ, Hoyo C, Murphy SK, Jirtle RL
  ILAR J 53:341-58 (2012)
  → Feature Article and Press Reports
• Dynamics of imprinted genes and their epigenetic mechanisms in castor bean seed with persistent endosperm
  Han B, Li Y, Wu D, Li DZ, Liu A, Xu W
  New Phytol 240:1868-1882 (2023)
• Genomic map of candidate human imprint control regions: the imprintome
  Jima DD, Skaar DA, Planchart A, Motsinger-Reif A, Cevik SE, Park SS, Cowley M, Wright F, House J, Liu A, Jirtle RL, Hoyo C
  Epigenetics (Jul 2022)
  → Feature Article and Press Reports

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